STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC107580432Ribose-phosphate pyrophosphokinase 1-like. (193 aa)    
Predicted Functional Partners:
LOC107556156
Amidophosphoribosyltransferase-like.
  
 0.949
ENSSGRP00000086941
Amidophosphoribosyltransferase-like.
  
 0.949
LOC107578334
Transketolase-like isoform X1.
   
 
 0.946
LOC107582382
Transketolase-like.
   
 
 0.946
LOC107568840
Transketolase-like.
   
 
 0.946
LOC107551595
Phosphoglucomutase / phosphopentomutase.
  
 0.934
LOC107591526
Phosphoglucomutase / phosphopentomutase.
  
 0.934
Umps
Uridine 5'-monophosphate synthase.
  
 
 0.932
LOC107581734
Phosphoribosyl pyrophosphate synthase-associated protein 2.
  
0.909
LOC107586915
Pyruvate dehydrogenase E1 component subunit beta, mitochondrial.
   
 0.817
Your Current Organism:
Sinocyclocheilus grahami
NCBI taxonomy Id: 75366
Other names: S. grahami
Server load: medium (66%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.