STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC107557014Solute carrier family 25 member 47-A-like isoform X1. (293 aa)    
Predicted Functional Partners:
Aasdh
Acyl-CoA synthetase family member 4 isoform X1.
   
  
 0.658
brix1
Biogenesis of ribosomes BRX1.
   
  
 0.653
LOC107585892
Carnitine O-palmitoyltransferase 2, mitochondrial-like.
   
  
 0.589
LOC107549124
Carnitine O-palmitoyltransferase 2, mitochondrial isoform X1.
   
  
 0.589
LOC107552752
Acyl-CoA synthetase family member 2, mitochondrial.
    
 
 0.535
ENSSGRP00000083043
Acyl-CoA synthetase family member 2, mitochondrial-like.
    
 
 0.535
LOC107591644
Ubiquinol-cytochrome c reductase subunit 7.
    
 
 0.527
LOC107592078
Ubiquinol-cytochrome c reductase subunit 7.
    
 
 0.527
LOC107556046
Phosphoserine aminotransferase-like isoform X1.
      
 0.526
LOC107548526
Phosphoserine aminotransferase-like.
      
 0.526
Your Current Organism:
Sinocyclocheilus grahami
NCBI taxonomy Id: 75366
Other names: S. grahami
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.