STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSSGRP00000007729annotation not available (186 aa)    
Predicted Functional Partners:
LOC107572061
Ubiquitin-conjugating enzyme E2 variant 1.
   
 0.658
LOC107584442
Serine/arginine-rich splicing factor 3 isoform X1.
    
 
 0.627
LOC107572211
Proteasome subunit alpha type-6-like.
    
 0.626
ENSSGRP00000006470
annotation not available
    
 0.626
LOC107578527
Proteasome subunit alpha type-6-like.
    
 0.626
LOC107573507
Tryptophan 2,3-dioxygenase B-like isoform X1.
   
  
 0.583
LOC107551803
Tryptophan 2,3-dioxygenase B.
   
  
 0.583
ENSSGRP00000083184
Mindbomb E3 ubiquitin protein ligase 2.
    
 0.569
Mib2
E3 ubiquitin-protein ligase MIB2 isoform X1.
    
 0.569
ENSSGRP00000057711
annotation not available
    
 0.550
Your Current Organism:
Sinocyclocheilus grahami
NCBI taxonomy Id: 75366
Other names: S. grahami
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.