STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSSGRP00000007734Cytochrome c-type heme lyase-like. (169 aa)    
Predicted Functional Partners:
COX10
Protoheme IX farnesyltransferase, mitochondrial-like isoform X1.
   
 
 0.970
ENSSGRP00000100842
Protoheme IX farnesyltransferase, mitochondrial-like.
   
 
 0.970
fech
Protoporphyrin/coproporphyrin ferrochelatase.
     
 0.930
LOC107594665
Cytochrome c-type heme lyase-like isoform X1.
  
  
 
0.903
ENSSGRP00000070463
Cytochrome c-type heme lyase-like.
  
  
 
0.901
ENSSGRP00000003904
Heme oxygenase-like.
     
 0.900
LOC107559231
Heme oxygenase-like.
     
 0.900
LOC107601585
Heme oxygenase 2-like isoform X1.
     
 0.900
LOC107566667
Heme oxygenase 2-like.
     
 0.900
ENSSGRP00000086299
Heme oxygenase-like.
     
 0.900
Your Current Organism:
Sinocyclocheilus grahami
NCBI taxonomy Id: 75366
Other names: S. grahami
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.