STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PRR16Protein Largen-like. (206 aa)    
Predicted Functional Partners:
ENSSGRP00000020960
Vacuolar protein sorting-associated protein 13D-like.
      
 0.595
Vps13d
Vacuolar protein sorting-associated protein 13D isoform X1.
      
 0.595
ENSSGRP00000024420
Cell wall protein IFF6-like.
      
 0.565
tmem154
Transmembrane protein 154 isoform X1.
      
 0.565
LOC107551210
Protein cordon-bleu-like.
      
 0.482
ENSSGRP00000069941
annotation not available
      
 0.482
LOC107598586
Proline-rich protein 12-like.
      
 0.454
ENSSGRP00000081243
Proline rich 12b.
      
 0.454
LOC107557376
Proline-rich protein 12-like isoform X1.
      
 0.454
ENSSGRP00000111794
Proline rich 12b.
      
 0.454
Your Current Organism:
Sinocyclocheilus grahami
NCBI taxonomy Id: 75366
Other names: S. grahami
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.