STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
vps37aVacuolar protein sorting-associated protein 37A isoform X1. (389 aa)    
Predicted Functional Partners:
ENSSGRP00000002322
annotation not available
    
 0.987
LOC107592928
Vacuolar protein sorting-associated protein 28 homolog isoform X1.
   
 0.982
LOC107591969
Vacuolar protein sorting-associated protein 28 homolog isoform X1.
   
 0.982
ENSSGRP00000002474
Tumor susceptibility gene 101 protein-like.
   
 0.958
Tsg101
Tumor susceptibility gene 101 protein.
   
 0.958
LOC107600444
Tumor susceptibility gene 101 protein-like isoform X1.
   
 0.958
ENSSGRP00000051817
Tumor susceptibility gene 101 protein-like.
   
 0.958
tsg101
Tumor susceptibility 101.
   
 0.958
ENSSGRP00000102780
Tumor susceptibility gene 101 protein-like.
   
 0.958
Vps25
Vacuolar protein-sorting-associated protein 25.
    
 0.952
Your Current Organism:
Sinocyclocheilus grahami
NCBI taxonomy Id: 75366
Other names: S. grahami
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.