STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSSGRP00000007858Interferon-induced very large GTPase 1-like. (363 aa)    
Predicted Functional Partners:
ENSSGRP00000020939
Polymerase (DNA directed), delta 2, regulatory subunit.
    
 0.718
ENSSGRP00000032432
annotation not available
    
 0.621
Fancm
Fanconi anemia group M protein.
    
 0.621
LOC107553605
Survival motor neuron protein 1-like isoform X1.
    
 0.580
ENSSGRP00000106053
Survival motor neuron protein 1-like.
    
 0.580
ENSSGRP00000002981
MUS81 structure-specific endonuclease subunit.
    
 0.566
ENSSGRP00000092762
MUS81 structure-specific endonuclease subunit.
    
 0.566
ENSSGRP00000016326
DNA polymerase delta catalytic subunit-like.
   
 0.526
ENSSGRP00000017974
annotation not available
   
 0.526
pold1
DNA polymerase delta catalytic subunit.
   
 0.526
Your Current Organism:
Sinocyclocheilus grahami
NCBI taxonomy Id: 75366
Other names: S. grahami
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.