STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSSGRP00000007867T-SNARE domain-containing protein 1-like. (241 aa)    
Predicted Functional Partners:
ENSSGRP00000008867
annotation not available
   
 0.833
Ykt6
Synaptobrevin homolog YKT6.
   
 0.833
LOC107602234
Synaptobrevin homolog YKT6.
   
 0.833
ENSSGRP00000008659
Bet1 golgi vesicular membrane trafficking protein.
   
 0.772
BET1L
Blocked early in transport 1.
   
 0.772
LOC107559993
Blocked early in transport 1.
   
 0.772
bet1
Blocked early in transport 1.
   
 0.772
ENSSGRP00000029848
N-ethylmaleimide-sensitive factor b.
   
 0.767
ENSSGRP00000054905
N-ethylmaleimide-sensitive factor b.
   
 0.767
ENSSGRP00000063924
N-ethylmaleimide-sensitive factor a.
   
 0.767
Your Current Organism:
Sinocyclocheilus grahami
NCBI taxonomy Id: 75366
Other names: S. grahami
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.