STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSSGRP00000007909Mdm2-binding protein-like. (801 aa)    
Predicted Functional Partners:
ENSSGRP00000060183
Treslin-like isoform X1.
   
 0.712
LOC107573896
Treslin-like isoform X1.
   
 0.712
LOC107556775
E3 ubiquitin-protein ligase Mdm2-like.
    
 0.674
LOC107590969
E3 ubiquitin-protein ligase Mdm2 isoform X1.
    
 0.674
Topbp1
DNA topoisomerase 2-binding protein 1 isoform X1.
   
 0.649
ENSSGRP00000068417
Cyclin C.
   
 0.596
LOC107583980
Cyclin-C.
   
 0.596
ENSSGRP00000064987
BLM RecQ like helicase.
   
 
 0.579
ENSSGRP00000089578
BLM RecQ like helicase.
   
 
 0.579
LOC107552942
Transcription initiation factor TFIID TATA-box-binding protein.
    
 0.576
Your Current Organism:
Sinocyclocheilus grahami
NCBI taxonomy Id: 75366
Other names: S. grahami
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