STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC107559658Mothers against decapentaplegic homolog 4 isoform X1. (550 aa)    
Predicted Functional Partners:
smad2
Mothers against decapentaplegic homolog 2.
   
0.990
smad3
Mothers against decapentaplegic homolog 3.
   
0.984
ENSSGRP00000108174
Mothers against decapentaplegic homolog 3-like.
   
 0.980
ENSSGRP00000062617
Mothers against decapentaplegic homolog 1.
   
0.935
SMAD9
Mothers against decapentaplegic homolog 9-like isoform X1.
   
0.926
ENSSGRP00000036219
Mothers against decapentaplegic homolog 1-like.
   
0.920
LOC107563595
Mothers against decapentaplegic homolog 5 isoform X1.
   
0.920
LOC107599811
Ski oncogene-like.
   
 0.888
LOC107548407
Ski oncogene-like.
   
 0.888
LOC107553101
Mothers against decapentaplegic homolog 3.
   
0.853
Your Current Organism:
Sinocyclocheilus grahami
NCBI taxonomy Id: 75366
Other names: S. grahami
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.