STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC107598287Immediate early response gene 5-like protein. (302 aa)    
Predicted Functional Partners:
LOC107568604
Tissue factor pathway inhibitor.
      
 0.617
phax
Phosphorylated adapter RNA export protein.
      
 0.603
LOC107570078
Immunoglobulin-like domain-containing receptor 1.
      
 0.520
LOC107570836
FXYD domain-containing ion transport regulator 6-like.
      
 0.520
ENSSGRP00000002318
RNA-binding protein 4B-like.
      
 0.491
LOC107556667
Leucine-rich repeat-containing protein 4B-like.
      
 0.491
LOC107553407
Leucine-rich repeat-containing protein 4B-like.
      
 0.491
LOC107562822
RNA-binding protein 4.1-like.
      
 0.491
LOC107573485
N-alpha-acetyltransferase 25, NatB auxiliary subunit-like isoform X1.
      
 0.489
LOC107602242
N-terminal acetyltransferase B complex non-catalytic subunit.
      
 0.489
Your Current Organism:
Sinocyclocheilus grahami
NCBI taxonomy Id: 75366
Other names: S. grahami
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