STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSSGRP00000007974C2 domain-containing protein 3-like. (229 aa)    
Predicted Functional Partners:
ENSSGRP00000030248
Centrosomal protein of 41 kDa-like isoform X1.
     
 0.754
LOC107574848
Centrosomal protein of 41 kDa isoform X1.
     
 0.754
ENSSGRP00000102176
annotation not available
    
 0.718
ENSSGRP00000006139
annotation not available
    
 0.702
ENSSGRP00000051020
Oral-facial-digital syndrome 1 protein homolog.
    
 0.702
sclt1
Sodium channel and clathrin linker 1.
    
 0.678
ENSSGRP00000057520
Leucine rich repeat containing 45.
     
 0.667
Evc
Ellis van creveld syndrome protein 1.
    
 0.666
ENSSGRP00000047322
annotation not available
   
  
 0.656
ENSSGRP00000080148
Coiled-coil domain-containing protein 41.
     
 0.654
Your Current Organism:
Sinocyclocheilus grahami
NCBI taxonomy Id: 75366
Other names: S. grahami
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