STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC107558121E3 ubiquitin-protein ligase RNF34-like isoform X1. (384 aa)    
Predicted Functional Partners:
Actr5
Actin-related protein 5.
      
 0.493
ENSSGRP00000076720
Protein TESPA1-like isoform X1.
      
 0.482
ENSSGRP00000085555
Protein TESPA1-like.
      
 0.482
ENSSGRP00000020342
Alpha-1-microglobulin/bikunin precursor.
      
 0.452
LOC107599945
Cellular tumor antigen p53.
    
  0.450
LOC107592291
Cellular tumor antigen p53-like.
    
  0.450
LOC107597969
GON-4-like protein.
      
 0.447
ENSSGRP00000065898
Androgen-induced gene 1 protein-like.
      
 0.414
ENSSGRP00000067258
Androgen-induced gene 1 protein-like.
      
 0.414
LOC107555804
Androgen-dependent TFPI-regulating protein-like isoform X1.
      
 0.414
Your Current Organism:
Sinocyclocheilus grahami
NCBI taxonomy Id: 75366
Other names: S. grahami
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.