STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC107597137R-spondin 1. (264 aa)    
Predicted Functional Partners:
ENSSGRP00000054890
E3 ubiquitin-protein ligase ZNRF3 isoform X1.
   
 0.997
ENSSGRP00000103390
E3 ubiquitin-protein ligase ZNRF3-like.
   
 0.997
LOC107554901
Leucine-rich repeat-containing G-protein coupled receptor 4 isoform X1.
   
 0.996
ENSSGRP00000087859
annotation not available
   
 0.977
ENSSGRP00000103246
annotation not available
   
 0.977
ENSSGRP00000068297
Danio rerio leucine-rich repeat containing G protein-coupled receptor 4 (lgr4), mRNA.
   
 0.969
LOC107582399
Wingless-type MMTV integration site family, member 4.
   
  
 0.852
LOC107565731
Wingless-type MMTV integration site family, member 4.
   
  
 0.849
LOC107554709
Growth/differentiation factor 9-like.
    
 0.815
LOC107559606
Growth/differentiation factor 9-like.
    
 0.815
Your Current Organism:
Sinocyclocheilus grahami
NCBI taxonomy Id: 75366
Other names: S. grahami
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.