STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC107573956Cis-aconitate decarboxylase-like. (498 aa)    
Predicted Functional Partners:
LOC107597428
Cis-aconitate decarboxylase-like.
  
  
 
0.903
ENSSGRP00000098753
Cis-aconitate decarboxylase-like.
  
  
 
0.902
ENSSGRP00000086290
GTP binding protein 3, mitochondrial.
   
 
 0.791
LOC107597423
Cytochrome c oxidase assembly protein subunit 17.
      
 0.758
LOC107569254
Cytochrome c oxidase assembly protein subunit 17.
      
 0.758
ENSSGRP00000009494
Aminomethyltransferase.
  
 0.749
Amt
Aminomethyltransferase, mitochondrial.
  
 0.749
ENSSGRP00000010125
Sarcosine dehydrogenase.
  
 0.737
Dmgdh
Dimethylglycine dehydrogenase, mitochondrial.
  
 0.737
sardh
Sarcosine dehydrogenase, mitochondrial isoform X1.
  
 0.737
Your Current Organism:
Sinocyclocheilus grahami
NCBI taxonomy Id: 75366
Other names: S. grahami
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.