STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
fdft1Farnesyl-diphosphate farnesyltransferase. (451 aa)    
Predicted Functional Partners:
ENSSGRP00000096012
Squalene monooxygenase-like.
  
 
 0.993
LOC107556968
Squalene monooxygenase-like.
  
 
 0.993
LOC107568024
Lanosterol 14-alpha demethylase.
  
 
 0.988
ENSSGRP00000023856
Farnesyl pyrophosphate synthase-like.
  
 0.973
fdps
Farnesyl pyrophosphate synthase isoform X1.
  
 0.973
LOC107551038
17beta-estradiol 17-dehydrogenase / 3beta-hydroxysteroid 3-dehydrogenase.
   
 
 0.969
hmgcs1
Hydroxymethylglutaryl-CoA synthase, cytoplasmic isoform X1.
  
 
 0.965
ggps1
Geranylgeranyl diphosphate synthase, type III.
  
 0.964
ERG28
Probable ergosterol biosynthetic protein 28.
   
 
 0.962
ENSSGRP00000028727
Farnesyl pyrophosphate synthase-like.
  
 0.952
Your Current Organism:
Sinocyclocheilus grahami
NCBI taxonomy Id: 75366
Other names: S. grahami
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.