STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC107573953Uncharacterized protein LOC107573953. (875 aa)    
Predicted Functional Partners:
ENSSGRP00000079764
Probable tRNA N6-adenosine threonylcarbamoyltransferase, mitochondrial.
  
 
 0.879
osgepl1
Probable tRNA N6-adenosine threonylcarbamoyltransferase, mitochondrial.
  
 
 0.879
LOC107571754
Pseudouridine-5'-phosphatase-like isoform X1.
  
 
  0.864
LOC107602763
Pseudouridine-5'-phosphatase-like.
  
 
  0.864
LOC107579596
Probable tRNA N6-adenosine threonylcarbamoyltransferase.
  
 
 0.850
LOC107583976
Probable tRNA N6-adenosine threonylcarbamoyltransferase.
  
 
 0.850
ENSSGRP00000094655
annotation not available
  
 
 0.850
mettl1
TRNA (guanine-N(7)-)-methyltransferase.
  
  
 0.686
ENSSGRP00000086290
GTP binding protein 3, mitochondrial.
     
 0.678
LOC107567089
HemK methyltransferase family member 1-like isoform X1.
  
  
 0.667
Your Current Organism:
Sinocyclocheilus grahami
NCBI taxonomy Id: 75366
Other names: S. grahami
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