Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC107573953Uncharacterized protein LOC107573953. (875 aa)    
Predicted Functional Partners:
ENSSGRP00000079764
Probable tRNA N6-adenosine threonylcarbamoyltransferase, mitochondrial.
  
 0.813
osgepl1
Probable tRNA N6-adenosine threonylcarbamoyltransferase, mitochondrial.
  
 0.813
LOC107579596
Probable tRNA N6-adenosine threonylcarbamoyltransferase.
  
 0.795
LOC107583976
Probable tRNA N6-adenosine threonylcarbamoyltransferase.
  
 0.795
ENSSGRP00000094655
annotation not available
  
 0.795
ENSSGRP00000050918
Complement C1q-like protein 4 isoform X1.
      
 0.667
LOC107571754
Pseudouridine-5'-phosphatase-like isoform X1.
    
  0.655
LOC107602763
Pseudouridine-5'-phosphatase-like.
    
  0.655
mettl1
TRNA (guanine-N(7)-)-methyltransferase.
  
  
 0.626
LOC107561447
Sulfotransferase family cytosolic 2B member 1-like.
      
 0.615
Your Current Organism:
Sinocyclocheilus grahami
NCBI taxonomy Id: 75366
Other names: S. grahami
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