STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC1075987245-hydroxytryptamine receptor 5A-like isoform X1. (346 aa)    
Predicted Functional Partners:
LOC107554377
Guanine nucleotide-binding protein G(olf) subunit alpha.
    
  0.726
gnal
Guanine nucleotide-binding protein G(olf) subunit alpha.
    
  0.726
LOC107596786
Guanine nucleotide-binding protein G(s) subunit alpha.
    
  0.726
LOC107554191
Guanine nucleotide-binding protein G(s) subunit alpha-like.
    
  0.726
LOC107565637
Lumican-like.
     
 0.525
LOC107585613
Lumican-like.
     
 0.525
HTR1F
5-hydroxytryptamine receptor 1F-like.
   
 
0.516
LOC107598773
5-hydroxytryptamine receptor 1F-like.
   
 
0.516
LOC107552231
5-hydroxytryptamine receptor 1F-like.
   
 
0.516
HTR1E
5-hydroxytryptamine receptor 1E.
   
 
0.516
Your Current Organism:
Sinocyclocheilus grahami
NCBI taxonomy Id: 75366
Other names: S. grahami
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.