STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSSGRP00000008649Four and a half LIM domains 3b. (161 aa)    
Predicted Functional Partners:
Vangl2
Vang-like protein 2.
    
 0.439
ENSSGRP00000042478
Vang-like protein 2.
    
 0.439
ENSSGRP00000064714
annotation not available
    
 0.439
ENSSGRP00000100267
Vang-like protein 1 isoform X1.
    
 0.439
ENSSGRP00000105407
Vang-like protein 1.
    
 0.439
ENSSGRP00000105807
Vang-like protein 1.
    
 0.439
LOC107597062
Segment polarity protein dishevelled homolog DVL-2-like.
    
 0.435
DVL1
Segment polarity protein dishevelled homolog DVL-1-like isoform X1.
    
 0.435
LOC107559372
Segment polarity protein dishevelled homolog DVL-3-like.
    
 0.435
ENSSGRP00000076637
Dishevelled segment polarity protein 1b.
    
 0.435
Your Current Organism:
Sinocyclocheilus grahami
NCBI taxonomy Id: 75366
Other names: S. grahami
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.