STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
thrap3Thyroid hormone receptor-associated protein 3 isoform X1. (895 aa)    
Predicted Functional Partners:
mthfs
5-formyltetrahydrofolate cyclo-ligase isoform X1.
      
 0.616
LOC107578020
Reticulon-4 receptor-like 1.
    
 0.540
LOC107589340
Reticulon-4 receptor-like 1.
    
 0.540
LOC107588490
SH3 domain-binding protein 5-like.
      
 0.504
LOC107556100
SH3 domain-binding protein 5-like.
      
 0.504
LOC107596045
Testis-expressed sequence 10 protein homolog.
   
 0.504
ENSSGRP00000084387
Serine/threonine kinase 10.
   
  
 0.504
LOC107593696
Testis-expressed sequence 10 protein homolog.
   
 0.504
stk10
Serine/threonine-protein kinase 10 isoform X1.
   
  
 0.504
LOC107572813
Matrix metalloproteinase-15 (membrane-inserted).
     
 0.501
Your Current Organism:
Sinocyclocheilus grahami
NCBI taxonomy Id: 75366
Other names: S. grahami
Server load: medium (66%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.