STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Oscp1Protein OSCP1. (292 aa)    
Predicted Functional Partners:
ENSSGRP00000089707
WD repeat domain 54.
    
   0.495
LOC107552569
WD repeat-containing protein 54-like.
    
   0.495
LOC107597442
Beta-sarcoglycan-like isoform X1.
      
 0.485
LOC107588492
Serine/threonine-protein kinase 40.
      
 0.452
ENSSGRP00000066586
Serine/threonine kinase 40.
      
 0.452
LOC107554899
ARL14 effector protein-like.
      
 0.436
ENSSGRP00000068304
ADP-ribosylation factor-like 14 effector protein.
      
 0.436
Your Current Organism:
Sinocyclocheilus grahami
NCBI taxonomy Id: 75366
Other names: S. grahami
Server load: medium (54%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.