STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC107559689Small integral membrane protein 13-like. (88 aa)    
Predicted Functional Partners:
LOC107578433
Huntingtin-interacting protein K-like.
   
 
 0.806
LOC107600460
Huntingtin-interacting protein K-like.
   
 
 0.806
ENSSGRP00000103134
Huntingtin-interacting protein K.
   
 
 0.806
LOC107590614
N-alpha-acetyltransferase 60-like.
   
 
 0.770
LOC107563531
Cysteine-rich protein 2-binding protein-like isoform X1.
   
 
 0.770
LOC107591234
N-alpha-acetyltransferase 50 isoform X1.
   
 
 0.770
LOC107570376
Cysteine-rich protein 2-binding protein-like isoform X1.
   
 
 0.770
ENSSGRP00000091960
N(alpha)-acetyltransferase 50, NatE catalytic subunit.
   
 
 0.770
LOC107568044
N-alpha-acetyltransferase 60.
   
 
 0.770
ENSSGRP00000002847
annotation not available
    
 
 0.726
Your Current Organism:
Sinocyclocheilus grahami
NCBI taxonomy Id: 75366
Other names: S. grahami
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.