STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC107559693C-type lectin domain family 4 member F-like. (173 aa)    
Predicted Functional Partners:
LOC107554434
C-type lectin domain family 4 member E-like.
    
 0.944
LOC107550941
C-type lectin domain family 4 member E-like.
    
 0.944
LOC107597895
High affinity immunoglobulin epsilon receptor subunit gamma-like isoform X1.
   
 0.931
ENSSGRP00000013967
CD209 antigen-like protein C isoform X1.
   
 
 
0.908
LOC107551672
C-type lectin domain family 4 member E.
   
 
 
0.908
LOC107549484
CD209 antigen-like protein D isoform X1.
    
0.466
LOC107598399
CD209 antigen-like protein D.
    
0.466
Your Current Organism:
Sinocyclocheilus grahami
NCBI taxonomy Id: 75366
Other names: S. grahami
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.