STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC107564054Voltage-gated sodium channel type IV beta. (232 aa)    
Predicted Functional Partners:
ENSSGRP00000014704
Voltage-gated sodium channel type I beta.
   
 0.964
scn1b
Sodium channel subunit beta-1 isoform X1.
   
 0.964
ENSSGRP00000044902
Sodium channel protein type 4 subunit alpha-like isoform X1.
    
 0.958
ENSSGRP00000101661
Sodium channel protein type 1 subunit alpha-like.
    
 0.958
ENSSGRP00000065018
Sodium channel subunit beta-4-like isoform X1.
  
  
 
0.902
LOC107599210
Sodium channel subunit beta-4-like isoform X1.
  
  
 
0.902
LOC107592124
Voltage-gated sodium channel type I beta.
     
  0.900
LOC107600541
Voltage-gated sodium channel type I beta.
     
  0.900
LOC107561493
Voltage-gated sodium channel type IV beta.
  
  
 
0.900
ENSSGRP00000095586
Sodium channel protein type 4 subunit alpha B.
    
 0.752
Your Current Organism:
Sinocyclocheilus grahami
NCBI taxonomy Id: 75366
Other names: S. grahami
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.