STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC107577924Spindle and kinetochore-associated protein 3-like. (328 aa)    
Predicted Functional Partners:
ska1
Spindle and kinetochore-associated protein 1.
   
 
 0.991
LOC107577568
Spindle and kinetochore-associated protein 2 isoform X1.
   
 
 0.945
LOC107588916
Spindle and kinetochore-associated protein 2-like.
   
 
 0.945
ENSSGRP00000075269
Ttk protein kinase.
   
  
 0.851
ENSSGRP00000088161
Ttk protein kinase.
   
  
 0.851
LOC107588748
Chromosome-associated kinesin KIF4-like.
   
  
 0.843
LOC107554014
Exonuclease 1-like.
   
  
 0.819
LOC107583534
Exonuclease 1-like.
   
  
 0.819
Bub1
Mitotic checkpoint serine/threonine-protein kinase BUB1.
   
 
 0.791
LOC107557383
LOW QUALITY PROTEIN: cell division cycle-associated protein 2-like.
   
  
 0.771
Your Current Organism:
Sinocyclocheilus grahami
NCBI taxonomy Id: 75366
Other names: S. grahami
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.