STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC107579002Transmembrane emp24 domain-containing protein 6-like. (242 aa)    
Predicted Functional Partners:
tmed2
Transmembrane emp24 domain-containing protein 2 isoform X1.
   
 
 0.716
ENSSGRP00000064203
60S ribosome subunit biogenesis protein NIP7 homolog.
   
  
 0.645
nip7
60S ribosome subunit biogenesis protein NIP7 homolog.
   
  
 0.645
qtrt1
Queuine tRNA-ribosyltransferase.
      
 0.640
ENSSGRP00000092030
Si:ch73-81k8.2.
      
 0.635
ufm1
Ubiquitin-fold modifier 1 isoform X1.
      
 0.628
ENSSGRP00000078609
Ubiquitin-fold modifier 1-like.
      
 0.628
trabd
TraB domain containing.
      
 0.627
LOC107583835
TraB domain-containing protein-like.
      
 0.627
ENSSGRP00000023566
Telomeric repeat-binding factor 2-like.
      
 0.623
Your Current Organism:
Sinocyclocheilus grahami
NCBI taxonomy Id: 75366
Other names: S. grahami
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.