Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
ENSSGRP00000009366Zgc:66447. (532 aa)    
Predicted Functional Partners:
Mnd1
Meiotic nuclear division protein 1 homolog.
      
 0.759
ENSSGRP00000085479
Zinc finger protein 185 with LIM domain.
    
 
 0.659
FAU
Small subunit ribosomal protein S30e.
   
  0.654
ENSSGRP00000003561
FAU ubiquitin like and ribosomal protein S30 fusion b.
   
  0.654
LOC107567395
Small subunit ribosomal protein S30e.
   
  0.654
LOC107555153
Small subunit ribosomal protein S30e.
   
  0.654
ENSSGRP00000054888
annotation not available
      
 0.598
ENSSGRP00000103385
X-box binding protein 1.
      
 0.598
LOC107591264
E3 ubiquitin-protein ligase RNF6-like.
      
 0.572
ENSSGRP00000092654
Ring finger protein (C3H2C3 type) 6.
      
 0.572
Your Current Organism:
Sinocyclocheilus grahami
NCBI taxonomy Id: 75366
Other names: S. grahami
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