STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSSGRP00000009383Collagen alpha-1(V) chain-like. (200 aa)    
Predicted Functional Partners:
ACTR10
Actin related protein 10.
    
 
 0.497
LOC107567388
Actin-related protein 10-like.
    
 
 0.497
ENSSGRP00000014114
FRAS1-related extracellular matrix protein 2-like.
    
 0.479
LOC107562469
Myosin heavy chain 1/2/3/4/8/13/7B/15.
    
 
 0.470
LOC107560365
Myosin-7-like isoform X1.
    
 
 0.470
ENSSGRP00000029988
Myosin heavy chain 6/7.
    
 
 0.470
LOC107599906
Myosin heavy chain 1/2/3/4/8/13/7B/15.
    
 
 0.470
LOC107589805
Myosin heavy chain 6/7.
    
 
 0.470
ENSSGRP00000099566
Myosin heavy chain 6/7.
    
 
 0.470
LOC107601512
Mannosyl-oligosaccharide alpha-1,3-glucosidase.
    
 
 0.451
Your Current Organism:
Sinocyclocheilus grahami
NCBI taxonomy Id: 75366
Other names: S. grahami
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.