STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC107554307PERQ amino acid-rich with GYF domain-containing protein 1-like. (1030 aa)    
Predicted Functional Partners:
EIF4E2
Eukaryotic translation initiation factor 4E family member 2.
    
 
 0.822
LOC107557886
Eukaryotic translation initiation factor 4E type 2-like isoform X1.
    
 
 0.822
LOC107600102
Eukaryotic translation initiation factor 4E type 2-like.
    
 
 0.822
ddx6
DEAD-box helicase 6.
    
 
 0.767
LOC107572719
Probable ATP-dependent RNA helicase ddx6.
    
 
 0.767
LOC107599547
Probable ATP-dependent RNA helicase ddx6.
    
 
 0.767
LOC107595651
Probable ATP-dependent RNA helicase ddx6.
    
 
 0.767
LOC107565587
Probable ATP-dependent RNA helicase DDX6.
    
 
 0.767
LOC107593657
Probable ATP-dependent RNA helicase ddx6.
    
 
 0.767
ENSSGRP00000000427
Trinucleotide repeat-containing gene 6B protein-like.
    
 
 0.733
Your Current Organism:
Sinocyclocheilus grahami
NCBI taxonomy Id: 75366
Other names: S. grahami
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