STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ANKRD46Ankyrin repeat domain-containing protein 46. (228 aa)    
Predicted Functional Partners:
LOC107553259
UBX domain-containing protein 7-like.
    
 0.846
LOC107563300
UBX domain-containing protein 7-like isoform X1.
    
 0.846
ENSSGRP00000020633
Cullin 2.
    
 0.835
ENSSGRP00000079993
Cullin 2.
    
 0.835
LOC107560250
Transcription elongation factor B polypeptide 1-like.
    
 0.668
LOC107550711
Transcription elongation factor B polypeptide 1.
    
 0.668
LOC107550711-2
Transcription elongation factor B polypeptide 1.
    
 0.668
ENSSGRP00000043602
annotation not available
    
 0.609
ENSSGRP00000112096
annotation not available
    
 0.609
LOC107564001
Transcription elongation factor B polypeptide 2-like.
    
 0.596
Your Current Organism:
Sinocyclocheilus grahami
NCBI taxonomy Id: 75366
Other names: S. grahami
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.