STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC107579078Barrier-to-autointegration factor-like. (90 aa)    
Predicted Functional Partners:
LOC107560939
Emerin-like.
    
 0.969
LOC107570273
Emerin-like.
    
 0.969
LOC107597302
Ankyrin repeat and LEM domain-containing protein 2-like.
    
 0.885
lemd3
Inner nuclear membrane protein Man1.
   
 0.866
ENSSGRP00000086438
LEM domain containing 3.
   
 0.866
LOC107587813
Lamin-A-like.
   
 0.820
LOC107598000
Lamin-A-like.
   
 0.820
ENSSGRP00000004801
Lamin-L(II)-like.
   
 0.817
ENSSGRP00000029842
Lamin-B2-like.
   
 0.817
ENSSGRP00000102890
Lamin-B2-like.
   
 0.817
Your Current Organism:
Sinocyclocheilus grahami
NCBI taxonomy Id: 75366
Other names: S. grahami
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.