STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSSGRP00000009486annotation not available (108 aa)    
Predicted Functional Partners:
LOC107584769
C-C chemokine receptor type 7-like.
   
 0.797
LOC107581378
C-C chemokine receptor type 7-like.
   
 0.797
ENSSGRP00000006487
annotation not available
   
 0.754
ENSSGRP00000039202
annotation not available
   
 0.754
LOC107578181
C-X-C chemokine receptor type 5-like.
   
 0.718
LOC107572720
C-X-C chemokine receptor type 5-like.
   
 0.718
LOC107588617
Stromal cell-derived factor 1-like isoform X1.
   
 0.687
LOC107566675
Stromal cell-derived factor 1-like.
   
 0.687
ENSSGRP00000089853
Chemokine (C-X-C motif) ligand 12a (stromal cell-derived factor 1).
   
 0.687
LOC107566036
Stromal cell-derived factor 1-like.
   
 0.687
Your Current Organism:
Sinocyclocheilus grahami
NCBI taxonomy Id: 75366
Other names: S. grahami
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.