STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSSGRP00000009592Transcription factor IIIB 50 kDa subunit-like. (95 aa)    
Predicted Functional Partners:
ENSSGRP00000009439
Transcription factor TFIIIB component B'' homolog.
    
 0.999
POLR3F
DNA-directed RNA polymerase III subunit RPC6.
    
 0.988
Polr3a
LOW QUALITY PROTEIN: DNA-directed RNA polymerase III subunit RPC1.
   
 0.986
gtf3c3
General transcription factor 3C polypeptide 3 (transcription factor C subunit 4).
    
 0.981
ENSSGRP00000019875
Calcitonin gene-related peptide-receptor component protein.
    
 0.972
Polr3h
DNA-directed RNA polymerase III subunit RPC8.
    
 0.970
LOC107552942
Transcription initiation factor TFIID TATA-box-binding protein.
   
 0.957
ENSSGRP00000061694
TATA box binding protein like 2.
   
 0.957
ENSSGRP00000099601
Transcription initiation factor TFIID TATA-box-binding protein.
   
 0.957
LOC107601858
Transcription initiation factor TFIID TATA-box-binding protein.
   
 0.957
Your Current Organism:
Sinocyclocheilus grahami
NCBI taxonomy Id: 75366
Other names: S. grahami
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.