STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
traf4TNF receptor-associated factor 4. (470 aa)    
Predicted Functional Partners:
ENSSGRP00000000760
Baculoviral IAP repeat-containing protein 6 (apollon).
    
 0.775
LOC107583536
Baculoviral IAP repeat-containing protein 6-like isoform X1.
    
 0.775
LOC107585960
Tumor necrosis factor receptor type 1-associated DEATH domain protein.
    
 0.771
LOC107594616
Tumor necrosis factor receptor type 1-associated DEATH domain protein-like.
    
 0.771
LOC107572061
Ubiquitin-conjugating enzyme E2 variant 1.
   
 0.758
LOC107595520
Neutrophil cytosolic factor 1-like.
    
 
 0.755
irak4
Interleukin-1 receptor-associated kinase 4.
   
 0.735
LOC107567735
Ubiquitin-small subunit ribosomal protein S27Ae.
    
 0.696
ENSSGRP00000004833
annotation not available
    
 0.696
LOC107567735-2
ubiquitin-40S ribosomal protein S27a.
    
 0.696
Your Current Organism:
Sinocyclocheilus grahami
NCBI taxonomy Id: 75366
Other names: S. grahami
Server load: low (38%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.