ENSSGRP00000009650 protein (Sinocyclocheilus grahami)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

ENSSGRP00000009650

Caspase recruitment domain family, member 11. (810 aa)

Predicted Functional Partners:

ENSSGRP00000031584

0.936

Malt1

0.936

ENSSGRP00000069702

0.936

LOC107588074

0.936

ENSSGRP00000044133

0.898

Ikbkb

0.871

ENSSGRP00000036872

0.820

ENSSGRP00000077600

0.820

LOC107600299

0.807

LOC107582675

0.807

Your Current Organism:

Sinocyclocheilus grahami

NCBI taxonomy Id: 75366
Other names: S. grahami

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSSGRP00000009650	ENSSGRP00000031584	ENSSGRP00000009650	ENSSGRP00000031584	Caspase recruitment domain family, member 11.	Mucosa-associated lymphoid tissue lymphoma translocation protein 1-like.	0.936
ENSSGRP00000009650	ENSSGRP00000036872	ENSSGRP00000009650	ENSSGRP00000036872	Caspase recruitment domain family, member 11.	Mitogen-activated protein kinase kinase kinase 7.	0.820
ENSSGRP00000009650	ENSSGRP00000044133	ENSSGRP00000009650	ENSSGRP00000044133	Caspase recruitment domain family, member 11.	Inhibitor of nuclear factor kappa B kinase regulatory subunit gamma.	0.898
ENSSGRP00000009650	ENSSGRP00000069702	ENSSGRP00000009650	ENSSGRP00000069702	Caspase recruitment domain family, member 11.	Mucosa-associated lymphoid tissue lymphoma translocation protein 1-like.	0.936
ENSSGRP00000009650	ENSSGRP00000077600	ENSSGRP00000009650	ENSSGRP00000077600	Caspase recruitment domain family, member 11.	Mitogen-activated protein kinase kinase kinase 7-like.	0.820
ENSSGRP00000009650	Ikbkb	ENSSGRP00000009650	ENSSGRP00000101442	Caspase recruitment domain family, member 11.	Inhibitor of nuclear factor kappa-B kinase subunit beta.	0.871
ENSSGRP00000009650	LOC107582675	ENSSGRP00000009650	ENSSGRP00000033219	Caspase recruitment domain family, member 11.	Protein kinase C delta type-like isoform X1.	0.807
ENSSGRP00000009650	LOC107588074	ENSSGRP00000009650	ENSSGRP00000075365	Caspase recruitment domain family, member 11.	Mucosa-associated lymphoid tissue lymphoma translocation protein 1 homolog.	0.936
ENSSGRP00000009650	LOC107600299	ENSSGRP00000009650	ENSSGRP00000003249	Caspase recruitment domain family, member 11.	Novel protein kinase C delta type.	0.807
ENSSGRP00000009650	Malt1	ENSSGRP00000009650	ENSSGRP00000069598	Caspase recruitment domain family, member 11.	Mucosa-associated lymphoid tissue lymphoma translocation protein 1.	0.936
ENSSGRP00000031584	ENSSGRP00000009650	ENSSGRP00000031584	ENSSGRP00000009650	Mucosa-associated lymphoid tissue lymphoma translocation protein 1-like.	Caspase recruitment domain family, member 11.	0.936
ENSSGRP00000031584	ENSSGRP00000036872	ENSSGRP00000031584	ENSSGRP00000036872	Mucosa-associated lymphoid tissue lymphoma translocation protein 1-like.	Mitogen-activated protein kinase kinase kinase 7.	0.684
ENSSGRP00000031584	ENSSGRP00000044133	ENSSGRP00000031584	ENSSGRP00000044133	Mucosa-associated lymphoid tissue lymphoma translocation protein 1-like.	Inhibitor of nuclear factor kappa B kinase regulatory subunit gamma.	0.915
ENSSGRP00000031584	ENSSGRP00000077600	ENSSGRP00000031584	ENSSGRP00000077600	Mucosa-associated lymphoid tissue lymphoma translocation protein 1-like.	Mitogen-activated protein kinase kinase kinase 7-like.	0.684
ENSSGRP00000031584	Ikbkb	ENSSGRP00000031584	ENSSGRP00000101442	Mucosa-associated lymphoid tissue lymphoma translocation protein 1-like.	Inhibitor of nuclear factor kappa-B kinase subunit beta.	0.974
ENSSGRP00000031584	LOC107582675	ENSSGRP00000031584	ENSSGRP00000033219	Mucosa-associated lymphoid tissue lymphoma translocation protein 1-like.	Protein kinase C delta type-like isoform X1.	0.499
ENSSGRP00000031584	LOC107588074	ENSSGRP00000031584	ENSSGRP00000075365	Mucosa-associated lymphoid tissue lymphoma translocation protein 1-like.	Mucosa-associated lymphoid tissue lymphoma translocation protein 1 homolog.	0.903
ENSSGRP00000031584	LOC107600299	ENSSGRP00000031584	ENSSGRP00000003249	Mucosa-associated lymphoid tissue lymphoma translocation protein 1-like.	Novel protein kinase C delta type.	0.499
ENSSGRP00000031584	Malt1	ENSSGRP00000031584	ENSSGRP00000069598	Mucosa-associated lymphoid tissue lymphoma translocation protein 1-like.	Mucosa-associated lymphoid tissue lymphoma translocation protein 1.	0.903
ENSSGRP00000036872	ENSSGRP00000009650	ENSSGRP00000036872	ENSSGRP00000009650	Mitogen-activated protein kinase kinase kinase 7.	Caspase recruitment domain family, member 11.	0.820