STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC107601373Peroxisomal N(1)-acetyl-spermine/spermidine oxidase-like. (497 aa)    
Predicted Functional Partners:
ENSSGRP00000109741
Sterol carrier protein 2a.
   
 
 0.604
ENSSGRP00000111100
Sterol carrier protein 2b.
   
 
 0.604
pex13
Peroxisome biogenesis factor 13.
   
 
  0.574
pex10
Peroxisome biogenesis factor 10.
     
 0.572
ENSSGRP00000011127
annotation not available
     
 0.569
ENSSGRP00000002333
Peroxisomal biogenesis factor 12.
     
 0.494
LOC107587685
Peroxisome assembly protein 12-like.
     
 0.494
ENSSGRP00000005732
SUMO-conjugating enzyme UBC9-B-like.
    
  0.455
ube2i
Ubiquitin-conjugating enzyme E2 I.
    
  0.455
LOC107583318
SUMO-conjugating enzyme UBC9-like.
    
  0.455
Your Current Organism:
Sinocyclocheilus grahami
NCBI taxonomy Id: 75366
Other names: S. grahami
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.