STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC107565141Methyl-CpG-binding domain protein 2-like isoform X1. (261 aa)    
Predicted Functional Partners:
ENSSGRP00000003799
Metastasis associated 1.
   
 0.832
ENSSGRP00000042758
Metastasis associated 1 family, member 3.
   
 0.832
Mta1
Metastasis-associated protein MTA1 isoform X1.
   
 0.832
LOC107558444
Metastasis-associated protein MTA2-like.
   
 0.832
ENSSGRP00000083546
Metastasis associated 1 family, member 2.
   
 0.832
ENSSGRP00000086002
Metastasis-associated protein MTA3-like.
   
 0.832
LOC107584269
Histone-binding protein RBBP4.
   
 0.827
LOC107562083
Histone-binding protein RBBP4.
   
 0.827
LOC107602791
Histone-binding protein RBBP7-like isoform X1.
   
 0.827
LOC107568807
Histone-binding protein RBBP4.
   
 0.827
Your Current Organism:
Sinocyclocheilus grahami
NCBI taxonomy Id: 75366
Other names: S. grahami
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.