STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSSGRP00000009815Actinodin3. (238 aa)    
Predicted Functional Partners:
ENSSGRP00000029755
Cyclin-dependent kinase 13.
    
 
 0.620
LOC107563019
Cyclin-dependent kinase 12-like isoform X1.
    
 
 0.620
LOC107549877
Cyclin-dependent kinase 12-like isoform X1.
    
 
 0.620
LOC107592129
Uncharacterized protein LOC107592129.
  
   
 0.519
LOC107592460-2
Uncharacterized LOC107592460.
  
   
 0.519
ENSSGRP00000002016
Uncharacterized protein LOC107592189.
  
   
 0.502
ENSSGRP00000002028
annotation not available
  
   
 0.494
LOC107592467-2
Uncharacterized protein LOC107592467 isoform X1.
  
   
 0.489
LOC107560198
Cyclin-K-like.
   
 
 0.461
LOC107593410
Cyclin-related protein FAM58A-like.
   
 
 0.461
Your Current Organism:
Sinocyclocheilus grahami
NCBI taxonomy Id: 75366
Other names: S. grahami
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.