STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC107587812Uncharacterized protein C18orf19 homolog B. (278 aa)    
Predicted Functional Partners:
ATAD3A
ATPase family AAA domain-containing protein 3-like.
    
 
 0.605
ENSSGRP00000072754
Elongation factor G, mitochondrial-like.
   
    0.576
LOC107602396
3-hydroxyisobutyrate dehydrogenase, mitochondrial-like.
   
  
 0.520
LOC107592003
3-hydroxyisobutyrate dehydrogenase, mitochondrial-like.
   
  
 0.520
ENSSGRP00000036871
3-hydroxyisobutyrate dehydrogenase b.
   
  
 0.519
LOC107550829
3-hydroxyisobutyrate dehydrogenase, mitochondrial-like isoform X1.
   
  
 0.519
ENSSGRP00000009867
Low-density lipoprotein receptor class A domain-containing protein 4-like isoform X1.
      
 0.501
ENSSGRP00000091792
Low-density lipoprotein receptor class A domain-containing protein 4-like.
      
 0.501
Your Current Organism:
Sinocyclocheilus grahami
NCBI taxonomy Id: 75366
Other names: S. grahami
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.