STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RPE65Retinoid isomerohydrolase / lutein isomerase. (538 aa)    
Predicted Functional Partners:
LOC107564324
Phosphatidylcholine-retinol O-acyltransferase.
     
 0.923
LOC107590773
Phosphatidylcholine-retinol O-acyltransferase.
     
 0.923
ENSSGRP00000069393
Phosphatidylcholine-retinol O-acyltransferase.
     
 0.923
LOC107564312
Phosphatidylcholine-retinol O-acyltransferase.
     
 0.919
lrat
Phosphatidylcholine-retinol O-acyltransferase.
     
 0.919
LOC107572197
Phosphatidylcholine-retinol O-acyltransferase.
     
 0.919
LOC107584387
Retinol dehydrogenase 10-B isoform X1.
   
 
 0.916
LOC107550714
Retinol dehydrogenase 10-B-like isoform X1.
   
 
 0.916
LOC107573570
11-cis-retinol dehydrogenase.
   
 
 0.914
LOC107586996
11-cis-retinol dehydrogenase.
   
 
 0.914
Your Current Organism:
Sinocyclocheilus grahami
NCBI taxonomy Id: 75366
Other names: S. grahami
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.