STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
dcp1aMRNA-decapping enzyme 1A isoform X1. (452 aa)    
Predicted Functional Partners:
edc3
Enhancer of mRNA-decapping protein 3 isoform X1.
   
 0.989
ENSSGRP00000016444
MRNA-decapping enzyme subunit 2.
    
 0.975
ENSSGRP00000068545
Decapping mRNA 2.
    
 0.975
ENSSGRP00000023920
5'-3' exoribonuclease 1-like.
    
 0.972
ENSSGRP00000082494
5'-3' exoribonuclease 1.
    
 0.972
ENSSGRP00000035169
Enhancer of mRNA decapping 4.
    
 0.969
edc4
Enhancer of mRNA-decapping protein 4 isoform X1.
    
 0.969
ENSSGRP00000007313
Regulator of nonsense transcripts 1-like.
    
 0.914
upf1
Regulator of nonsense transcripts 1 isoform X1.
    
 0.914
LOC107598520
DNA topoisomerase 2-associated protein PAT1.
    
 0.908
Your Current Organism:
Sinocyclocheilus grahami
NCBI taxonomy Id: 75366
Other names: S. grahami
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.