STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC107592768Protein eva-1 homolog A-like. (153 aa)    
Predicted Functional Partners:
Agbl5
LOW QUALITY PROTEIN: cytosolic carboxypeptidase-like protein 5.
      
 0.643
ENSSGRP00000002299
Neurofilament medium polypeptide-like.
      
 0.563
LOC107552168
Neurofilament medium polypeptide (neurofilament 3).
      
 0.563
LOC107573952
ES1 protein homolog, mitochondrial-like.
      
 0.509
LOC107570151
ES1 protein homolog, mitochondrial-like.
      
 0.509
ENSSGRP00000089723
Neurotrypsin-like.
      
 0.499
ENSSGRP00000110258
annotation not available
      
 0.499
ythdc1
YTH domain-containing protein 1-like.
      
 0.416
ENSSGRP00000073656
annotation not available
      
 0.416
FAM20A
FAM20A golgi associated secretory pathway pseudokinase.
     
 0.410
Your Current Organism:
Sinocyclocheilus grahami
NCBI taxonomy Id: 75366
Other names: S. grahami
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.