STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC107592780Grifin-like. (139 aa)    
Predicted Functional Partners:
ENSSGRP00000067128
Extracellular serine/threonine protein kinase FAM20C-like.
     
 0.625
LOC107560184
Pleckstrin homology domain-containing family G member 3-like.
      
 0.624
ENSSGRP00000008637
annotation not available
      
 0.624
LOC107589028
Beta-crystallin A4-like isoform X1.
      
 0.624
LOC107567754
Beta-crystallin A4-like.
      
 0.624
ENSSGRP00000037556
Ring finger protein 10.
      
 0.623
ENSSGRP00000112904
Ring finger protein 10.
      
 0.623
LOC107575135
Histone H1-like.
      
 0.615
ENSSGRP00000050318
Leucine-rich repeat, immunoglobulin-like and transmembrane domains 2.
      
 0.572
lrit2
Leucine-rich repeat, immunoglobulin-like domain and transmembrane domain-containing protein 2.
      
 0.572
Your Current Organism:
Sinocyclocheilus grahami
NCBI taxonomy Id: 75366
Other names: S. grahami
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.