STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSSGRP00000009990Sorting nexin-8-like. (523 aa)    
Predicted Functional Partners:
ENSSGRP00000001831
Cyclin-G-associated kinase-like isoform X1.
   
 0.934
gak
Cyclin-G-associated kinase isoform X1.
   
 0.934
ENSSGRP00000079901
Cyclin G associated kinase.
   
 0.934
msh3
DNA mismatch repair protein Msh3 isoform X1.
   
   0.910
ENSSGRP00000040788
annotation not available
   
   0.910
Snx5
Sorting nexin-5/6/32.
   
 0.872
snx6
Sorting nexin-5/6/32.
   
 0.806
ENSSGRP00000098440
Sorting nexin 6.
   
 0.806
ENSSGRP00000008884
Uncharacterized protein LOC107577850.
   
 0.803
LOC107600561
Sorting nexin-5-like.
   
 0.803
Your Current Organism:
Sinocyclocheilus grahami
NCBI taxonomy Id: 75366
Other names: S. grahami
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.