STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC107591926Pleckstrin homology domain-containing family F member 2-like. (245 aa)    
Predicted Functional Partners:
ENSSGRP00000111400
Pleckstrin homology domain-containing family H member 2-like.
      
 0.643
ENSSGRP00000003622
Pleckstrin homology domain-containing family H member 1-like.
      
 0.607
LOC107551352
Calcium uniporter protein, mitochondrial-like.
     
 0.593
LOC107564525
Calcium uniporter protein, mitochondrial.
     
 0.593
ENSSGRP00000001283
Sorting nexin 29.
    
 
 0.528
ENSSGRP00000068607
Sorting nexin-29-like.
    
 
 0.528
Neurl1b
E3 ubiquitin-protein ligase NEURL1B.
      
 0.527
LOC107551008
E3 ubiquitin-protein ligase NEURL1B-like isoform X1.
      
 0.527
LOC107574059
Protein FAM43A-like.
      
 0.524
LOC107551800
Protein FAM43A-like.
      
 0.524
Your Current Organism:
Sinocyclocheilus grahami
NCBI taxonomy Id: 75366
Other names: S. grahami
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.