STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSSGRP00000010025[histone H3]-dimethyl-L-lysine36 N-methyltransferase. (2629 aa)    
Predicted Functional Partners:
LOC107556578
DNA-directed RNA polymerase II subunit RPB1-like.
   
 0.948
LOC107584383
DNA-directed RNA polymerase II subunit RPB1 isoform X1.
   
 0.948
ENSSGRP00000030567
annotation not available
   
 0.946
ENSSGRP00000004141
annotation not available
   
 0.923
POLR2C
DNA-directed RNA polymerase II subunit RPB3-like.
   
 0.923
POLR2B
RNA polymerase II subunit B.
   
 0.921
POLR2B-2
DNA-directed RNA polymerase II subunit RPB2 isoform X1.
   
 0.921
USP34
Ubiquitin carboxyl-terminal hydrolase 34-like.
   
 
 0.868
Trip12
E3 ubiquitin-protein ligase TRIP12.
   
  
 0.865
ENSSGRP00000084766
E3 ubiquitin-protein ligase TRIP12-like.
   
  
 0.865
Your Current Organism:
Sinocyclocheilus grahami
NCBI taxonomy Id: 75366
Other names: S. grahami
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.