Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
LOC107591975Tumor protein p53-inducible nuclear protein 1-like isoform X1. (242 aa)    
Predicted Functional Partners:
LOC107599945
Cellular tumor antigen p53.
    
 0.944
LOC107592291
Cellular tumor antigen p53-like.
    
 0.944
map1lc3c
Microtubule-associated proteins 1A/1B light chain 3C isoform X1.
    
 0.861
ENSSGRP00000067042
annotation not available
    
 0.861
LOC107549485
Gamma-aminobutyric acid receptor-associated protein-like 1 isoform X1.
    
  0.857
ENSSGRP00000044722
Microtubule-associated protein 1 light chain 3 gamma, like.
    
  0.857
LOC107549485-2
Gamma-aminobutyric acid receptor-associated protein-like 1.
    
  0.857
LOC107550867
Microtubule-associated proteins 1A/1B light chain 3C-like.
    
  0.857
LOC107582631
Vacuole membrane protein 1-like.
     
 0.831
ENSSGRP00000091822
Vacuole membrane protein 1.
     
 0.831
Your Current Organism:
Sinocyclocheilus grahami
NCBI taxonomy Id: 75366
Other names: S. grahami
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