Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
LOC107577378Phenylalanine--tRNA ligase beta subunit-like. (297 aa)    
Predicted Functional Partners:
ENSSGRP00000006349
Phenylalanine--tRNA ligase alpha subunit-like.
  
 0.998
LOC107593111
Phenylalanine--tRNA ligase, mitochondrial-like.
  
 0.981
ENSSGRP00000080596
annotation not available
  
 0.981
FARS2
Phenylalanine--tRNA ligase, mitochondrial-like.
  
 0.981
LOC107569008
Bifunctional glutamate/proline--tRNA ligase-like.
  
 
 0.960
ENSSGRP00000108769
Bifunctional glutamate/proline--tRNA ligase-like isoform X1.
  
 
 0.960
ENSSGRP00000014236
Isoleucine--tRNA ligase, cytoplasmic-like.
  
 
 0.927
ENSSGRP00000098875
isoleucyl-tRNA synthetase 1.
  
 
 0.927
Yars
Tyrosine--tRNA ligase, cytoplasmic.
  
  
 0.907
ENSSGRP00000102125
Tyrosine--tRNA ligase, cytoplasmic-like.
  
  
 0.907
Your Current Organism:
Sinocyclocheilus grahami
NCBI taxonomy Id: 75366
Other names: S. grahami
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