Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC107581538Tumor necrosis factor receptor superfamily member 16-like. (415 aa)    
Predicted Functional Partners:
ENSSGRP00000076310
LOW QUALITY PROTEIN: nerve growth factor-like.
     
 0.951
LOC107595107
Brain-derived neurotrophic factor isoform X1.
     
 0.936
Artn
Artemin.
     
 0.932
ENSSGRP00000047289
Tumor necrosis factor receptor superfamily member 16-like.
    
  0.931
LOC107589415
Ephrin-A1-like.
     
 0.915
LOC107554201
Nerve growth factor, beta.
     
 0.911
angpt2
Angiopoietin 2.
     
  0.910
ENSSGRP00000040497
Platelet derived growth factor c.
     
  0.909
ENSSGRP00000050763
Ephrin-A5-like.
     
 0.897
igf1
Insulin-like growth factor 1.
     
  0.894
Your Current Organism:
Sinocyclocheilus grahami
NCBI taxonomy Id: 75366
Other names: S. grahami
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