Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC107585739SPRY domain-containing SOCS box protein 4-like. (281 aa)    
Predicted Functional Partners:
LOC107560250
Transcription elongation factor B polypeptide 1-like.
    
  0.818
LOC107550711
Transcription elongation factor B polypeptide 1.
    
  0.818
LOC107550711-2
Transcription elongation factor B polypeptide 1.
    
  0.818
skp1
S-phase kinase-associated protein 1 isoform X1.
   
 0.804
LOC107551625
Cullin-5-like.
    
 0.802
LOC107582587
Cullin-5.
    
 0.802
ENSSGRP00000092179
Cullin-5-like.
    
 0.802
LOC107548163
Cullin-5-like isoform X1.
    
 0.802
LOC107564001
Transcription elongation factor B polypeptide 2-like.
    
 0.695
LOC107583061
Transcription elongation factor B polypeptide 2-like.
    
 0.695
Your Current Organism:
Sinocyclocheilus grahami
NCBI taxonomy Id: 75366
Other names: S. grahami
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